AmyloGram

Prediction of Amyloid Proteins

Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.

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Description file content

Package
AmyloGram
Type
Package
Title
Prediction of Amyloid Proteins
Version
1.1
LazyData
TRUE
Date
2017-10-11
Description
Predicts amyloid proteins using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI.
License
GPL-3
URL
BugReports
https://github.com/michbur/AmyloGram/issues
RoxygenNote
6.0.1
Depends
R (>= 3.0.0)
Imports
biogram, ranger, seqinr, shiny
Repository
CRAN
NeedsCompilation
no
Packaged
2017-10-11 14:35:25 UTC; michal
Author
Michal Burdukiewicz [cre, aut], Piotr Sobczyk [ctb], Stefan Roediger [ctb]
Maintainer
Michal Burdukiewicz
Date/Publication
2017-10-11 14:46:15 UTC

install.packages('AmyloGram')

1.1

2 months ago

https://github.com/michbur/AmyloGram

Michal Burdukiewicz

GPL-3

Depends on

R (>= 3.0.0)

Imports

biogram, ranger, seqinr, shiny

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