CausalKinetiX

Learning Stable Structures in Kinetic Systems

Implementation of 'CausalKinetiX', a framework for learning stable structures in kinetic systems. Apart from the main functions CausalKinetiX() and CausalKinetiX.modelranking() it includes functions to generate data from three simulations models, which can be used to benchmark structure learning methods for linear ordinary differential equation models. A detailed description of the underlying methods as well as details on the examples are given in Pfister, Bauer and Peters (2018) <arXiv:1810.11776>.

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Description file content

Package
CausalKinetiX
Title
Learning Stable Structures in Kinetic Systems
Version
0.2.1
Description
Implementation of 'CausalKinetiX', a framework for learning stable structures in kinetic systems. Apart from the main functions CausalKinetiX() and CausalKinetiX.modelranking() it includes functions to generate data from three simulations models, which can be used to benchmark structure learning methods for linear ordinary differential equation models. A detailed description of the underlying methods as well as details on the examples are given in Pfister, Bauer and Peters (2018) .
License
GPL-3
Encoding
UTF-8
LazyData
true
RoxygenNote
6.1.1
Imports
fda, cvTools, quadprog, randomForest, deSolve, stats, graphics, pspline, utils, glmnet, sundialr (>= 0.1.3)
NeedsCompilation
no
Packaged
2019-06-20 14:50:20 UTC; pfisteni
Author
Niklas Pfister [aut, cre], Stefan Bauer [aut], Jonas Peters [aut]
Maintainer
Niklas Pfister
Repository
CRAN
Date/Publication
2019-06-20 15:10:07 UTC

install.packages('CausalKinetiX')

0.2.1

a month ago

Niklas Pfister

GPL-3

Imports

fda, cvTools, quadprog, randomForest, deSolve, stats, graphics, pspline, utils, glmnet, sundialr (>= 0.1.3)

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