CloneSeeker

Seeking and Finding Clones in Copy Number and Sequencing Data

Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) <doi:10.1093/bioinformatics/btz057>.

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Description file content

Package
CloneSeeker
Version
1.0.7
Date
2019-05-06
Title
Seeking and Finding Clones in Copy Number and Sequencing Data
Author
Kevin R. Coombes, Mark Zucker
Maintainer
Kevin R. Coombes
Description
Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) .
Depends
R (>= 3.0)
Imports
methods, graphics, combinat, gtools, quantmod
License
Apache License (== 2.0)
URL
NeedsCompilation
no
Packaged
2019-05-06 18:29:53 UTC; Kevin Coombes
Repository
CRAN
Date/Publication
2019-05-06 19:10:12 UTC

install.packages('CloneSeeker')

1.0.7

2 months ago

http://oompa.r-forge.r-project.org/

Kevin R. Coombes

Apache License (== 2.0)

Depends on

R (>= 3.0)

Imports

methods, graphics, combinat, gtools, quantmod

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