DisHet

Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples

Model cell type heterogeneity of bulk renal cell carcinoma. The observed gene expression in bulk tumor sample is modeled by a log-normal distribution with the location parameter structured as a linear combination of the component-specific gene expressions.

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Description file content

Package
DisHet
Type
Package
Title
Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
Version
1.0.0
Date
2018-05-25
Author
Tao Wang
Maintainer
Tao Wang
Depends
R (>= 2.15.0), gtools, matrixStats
Description
Model cell type heterogeneity of bulk renal cell carcinoma. The observed gene expression in bulk tumor sample is modeled by a log-normal distribution with the location parameter structured as a linear combination of the component-specific gene expressions.
License
GPL-2
NeedsCompilation
no
Packaged
2018-05-25 20:54:44 UTC; s168319
Repository
CRAN
Date/Publication
2018-05-25 21:40:01 UTC

install.packages('DisHet')

1.0.0

6 months ago

Tao Wang

GPL-2

Depends on

R (>= 2.15.0), gtools, matrixStats

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