FLightR

Reconstruct Animal Paths from Solar Geolocation Loggers Data

Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015) <doi:10.1186/s40462-015-0062-5>, general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017) <doi:10.1111/2041-210X.12765> and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016) <doi:10.1111/jav.00891>.

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Description file content

Package
FLightR
Type
Package
Title
Reconstruct Animal Paths from Solar Geolocation Loggers Data
Version
0.4.9
Date
2019-06-13
Description
Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015) , general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017) and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016) .
URL
BugReports
http://github.com/eldarrak/FLightR/issues
Depends
R (>= 3.0.2)
Imports
bit, ggsn, ggmap, ggplot2, CircStats, circular, GeoLight, fields, maptools, methods, mgcv, nlme, parallel, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm
License
GPL-3
ByteCompile
true
RoxygenNote
6.1.1
Suggests
covr, testthat, knitr, rmarkdown
VignetteBuilder
knitr
NeedsCompilation
no
Packaged
2019-06-14 15:49:41 UTC; eldar
Author
Eldar Rakhimberdiev [aut, cre], Anatoly Saveliev [aut], Julia Karagicheva [aut], Simeon Lisovski [ctb]
Maintainer
Eldar Rakhimberdiev
Repository
CRAN
Date/Publication
2019-06-14 16:30:24 UTC

install.packages('FLightR')

0.4.9

10 days ago

https://CRAN.R-project.org/package=FLightR

Eldar Rakhimberdiev

GPL-3

Depends on

R (>= 3.0.2)

Imports

bit, ggsn, ggmap, ggplot2, CircStats, circular, GeoLight, fields, maptools, methods, mgcv, nlme, parallel, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm

Suggests

covr, testthat, knitr, rmarkdown

Discussions