FLightR

A Package for Reconstructing Animal Paths from Solar Geolocation Loggers

Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015)<doi:10.1186/s40462-015-0062-5>, general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017)<doi:10.1111/2041-210X.12765> and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016)<doi:10.1111/jav.00891>.

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Description file content

Package
FLightR
Type
Package
Title
A Package for Reconstructing Animal Paths from Solar Geolocation Loggers
Version
0.4.8
Date
2019-02-04
Description
Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015), general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017) and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016).
URL
BugReports
http://github.com/eldarrak/FLightR/issues
Depends
R (>= 3.0.2)
Imports
bit, ggsn, ggmap, ggplot2, CircStats, circular, GeoLight, fields, maptools, methods, mgcv, nlme, parallel, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm
License
GPL-3
ByteCompile
true
RoxygenNote
6.1.1
Suggests
covr, testthat, knitr, rmarkdown
VignetteBuilder
knitr
NeedsCompilation
no
Packaged
2019-02-07 14:17:04 UTC; eldar
Author
Eldar Rakhimberdiev [aut, cre], Anatoly Saveliev [aut], Julia Karagicheva [aut], Simeon Lisovski [ctb]
Maintainer
Eldar Rakhimberdiev
Repository
CRAN
Date/Publication
2019-02-07 18:23:22 UTC

install.packages('FLightR')

0.4.8

14 days ago

https://CRAN.R-project.org/package=FLightR

Eldar Rakhimberdiev

GPL-3

Depends on

R (>= 3.0.2)

Imports

bit, ggsn, ggmap, ggplot2, CircStats, circular, GeoLight, fields, maptools, methods, mgcv, nlme, parallel, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm

Suggests

covr, testthat, knitr, rmarkdown

Discussions