GWASinspector

Comprehensive and Easy to Use Quality Control of GWAS Results

When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

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Description file content

Package
GWASinspector
Type
Package
Title
Comprehensive and Easy to Use Quality Control of GWAS Results
Version
1.3.4
Date
2019-11-20
Author
Alireza Ani [aut, cre], Peter J. van der Most [aut], Ahmad Vaez [aut], Ilja M. Nolte [aut]
Maintainer
Alireza Ani
Depends
R (>= 3.2)
Imports
ini (>= 0.3), futile.logger (>= 1.4), data.table (>= 1.12), hash (>= 2.2), tools (>= 3.0), ggplot2 (>= 3.0), knitr (>= 1.1), rmarkdown (>= 0.9), gridExtra, grid, RSQLite, kableExtra (>= 0.8), methods
Suggests
xlsx (>= 0.5)
VignetteBuilder
knitr
URL
Description
When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.
License
GPL-3
Encoding
UTF-8
LazyData
true
RoxygenNote
6.1.1
NeedsCompilation
no
Packaged
2019-11-30 06:47:08 UTC; Alireza
Repository
CRAN
Date/Publication
2019-12-01 20:30:02 UTC

install.packages('GWASinspector')

1.3.4

14 days ago

http://GWASinspector.com

Alireza Ani

GPL-3

Depends on

R (>= 3.2)

Imports

ini (>= 0.3), futile.logger (>= 1.4), data.table (>= 1.12), hash (>= 2.2), tools (>= 3.0), ggplot2 (>= 3.0), knitr (>= 1.1), rmarkdown (>= 0.9), gridExtra, grid, RSQLite, kableExtra (>= 0.8), methods

Suggests

xlsx (>= 0.5)

Discussions