HiCfeat

Multiple Logistic Regression for 3D Chromatin Domain Border Analysis

We propose a multiple logistic regression model to assess the influences of genomic features such as DNA-binding proteins and functional elements on topological domain borders.

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Description file content

Package
HiCfeat
Type
Package
Title
Multiple Logistic Regression for 3D Chromatin Domain Border Analysis
Version
1.4
Depends
R (>= 3.2.0), GenomicRanges, Matrix, glmnet, rtracklayer
Imports
IRanges, GenomeInfoDb, methods
Date
2018-12-04
Author
Raphael Mourad
Maintainer
Raphael Mourad
Description
We propose a multiple logistic regression model to assess the influences of genomic features such as DNA-binding proteins and functional elements on topological domain borders.
License
GPL-2
NeedsCompilation
no
Packaged
2018-12-04 10:09:30 UTC; mourad
Repository
CRAN
Date/Publication
2018-12-04 11:10:07 UTC

install.packages('HiCfeat')

1.4

5 days ago

Raphael Mourad

GPL-2

Depends on

R (>= 3.2.0), GenomicRanges, Matrix, glmnet, rtracklayer

Imports

IRanges, GenomeInfoDb, methods

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