MALDIquant

Quantitative Analysis of Mass Spectrometry Data

A complete analysis pipeline for matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional mass spectrometry data. In addition to commonly used plotting and processing methods it includes distinctive features, namely baseline subtraction methods such as morphological filters (TopHat) or the statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.

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Description file content

Package
MALDIquant
Version
1.19.2
Date
2019-03-13
Title
Quantitative Analysis of Mass Spectrometry Data
Depends
R (>= 3.2.0), methods
Imports
parallel
Suggests
knitr, testthat (>= 0.8)
Description
A complete analysis pipeline for matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) and other two-dimensional mass spectrometry data. In addition to commonly used plotting and processing methods it includes distinctive features, namely baseline subtraction methods such as morphological filters (TopHat) or the statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak alignment using warping functions, handling of replicated measurements as well as allowing spectra with different resolutions.
License
GPL (>= 3)
URL
BugReports
https://github.com/sgibb/MALDIquant/issues/
LazyLoad
yes
VignetteBuilder
knitr
RoxygenNote
5.0.1
NeedsCompilation
yes
Packaged
2019-03-13 20:43:23 UTC; sebastian
Author
Sebastian Gibb [aut, cre] (), Korbinian Strimmer [ths] ()
Maintainer
Sebastian Gibb
Repository
CRAN
Date/Publication
2019-03-13 21:57:22 UTC

install.packages('MALDIquant')

1.19.2

9 days ago

http://strimmerlab.org/software/maldiquant/

Sebastian Gibb

GPL (>= 3)

Depends on

R (>= 3.2.0), methods

Imports

parallel

Suggests

knitr, testthat (>= 0.8)

Discussions