ML.MSBD

Maximum Likelihood Inference on Multi-State Trees

Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani and T. Stadler (2017) <doi:10.1101/215491>.

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Description file content

Package
ML.MSBD
Type
Package
Title
Maximum Likelihood Inference on Multi-State Trees
Version
1.1.0
Date
2018-06-20
Description
Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani and T. Stadler (2017) .
License
GPL-3
Imports
ape (>= 4.1)
Suggests
knitr
RoxygenNote
6.0.1
VignetteBuilder
knitr
NeedsCompilation
no
Packaged
2018-07-09 09:12:30 UTC; bjoelle
Author
Joelle Barido-Sottani [aut, cre]
Maintainer
Joelle Barido-Sottani
Repository
CRAN
Date/Publication
2018-07-09 09:30:17 UTC

install.packages('ML.MSBD')

1.1.0

4 months ago

Joelle Barido-Sottani

GPL-3

Imports

ape (>= 4.1)

Suggests

knitr

Discussions