RNentropy

Entropy Based Method for the Detection of Significant Variation in Gene Expression Data

An implementation of a method based on information theory devised for the identification of genes showing a significant variation of expression across multiple conditions. Given expression estimates from any number of RNA-Seq samples and conditions it identifies genes or transcripts with a significant variation of expression across all the conditions studied, together with the samples in which they are over- or under-expressed. Zambelli et al. (2018) <doi:10.1093/nar/gky055>.

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Description file content

Package
RNentropy
Type
Package
Title
Entropy Based Method for the Detection of Significant Variation in Gene Expression Data
Version
1.2.0
Date
2018-03-03
Description
An implementation of a method based on information theory devised for the identification of genes showing a significant variation of expression across multiple conditions. Given expression estimates from any number of RNA-Seq samples and conditions it identifies genes or transcripts with a significant variation of expression across all the conditions studied, together with the samples in which they are over- or under-expressed. Zambelli et al. (2018) .
License
GPL-3
RoxygenNote
6.0.1
NeedsCompilation
no
Packaged
2018-03-02 14:22:42 UTC; federicozambelli
Author
Federico Zambelli [cre] (), Giulio Pavesi [aut] ()
Maintainer
Federico Zambelli
Depends
R (>= 2.10)
Repository
CRAN
Date/Publication
2018-03-02 14:35:13 UTC

install.packages('RNentropy')

1.2.0

2 months ago

Federico Zambelli

GPL-3

Depends on

R (>= 2.10)

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