SNPknock

Knockoffs for Hidden Markov Models and Genomic Data

Generates knockoff variables from discrete Markov chains and hidden Markov models, with specific support for genomic data. For more information, see the website below and the accompanying paper: Sesia et al., "Gene Hunting with Knockoffs for Hidden Markov Models", 2017, <arXiv:1706.04677>.

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Description file content

Package
SNPknock
Type
Package
Title
Knockoffs for Hidden Markov Models and Genomic Data
Version
0.5
Date
2017-10-10
Author
Matteo Sesia
Maintainer
Matteo Sesia
Description
Generates knockoff variables from discrete Markov chains and hidden Markov models, with specific support for genomic data. For more information, see the website below and the accompanying paper: Sesia et al., "Gene Hunting with Knockoffs for Hidden Markov Models", 2017, .
URL
License
GPL (>= 2)
Depends
R (>= 3.3.0)
Imports
Rcpp (>= 0.12.13)
Suggests
knitr, testthat
LinkingTo
Rcpp
RoxygenNote
6.0.1
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2017-10-10 18:51:00 UTC; msesia
Repository
CRAN
Date/Publication
2017-10-10 19:12:17 UTC

install.packages('SNPknock')

0.5

9 days ago

https://statweb.stanford.edu/~candes/papers/HMM_Knockoffs.pdf

Matteo Sesia

GPL (>= 2)

Depends on

R (>= 3.3.0)

Imports

Rcpp (>= 0.12.13)

Suggests

knitr, testthat

Discussions