SNPknock

Knockoffs for Hidden Markov Models and Genetic Data

Generates knockoff variables from discrete Markov chains and hidden Markov models, with specific support for genetic data. For more information, see the website below and the accompanying paper: Sesia et al., "Gene Hunting with Knockoffs for Hidden Markov Models", 2017, <arXiv:1706.04677>.

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Description file content

Package
SNPknock
Type
Package
Title
Knockoffs for Hidden Markov Models and Genetic Data
Version
0.7.1
Date
2018-05-30
Author
Matteo Sesia
Maintainer
Matteo Sesia
Description
Generates knockoff variables from discrete Markov chains and hidden Markov models, with specific support for genetic data. For more information, see the website below and the accompanying paper: Sesia et al., "Gene Hunting with Knockoffs for Hidden Markov Models", 2017, .
URL
License
GPL (>= 2)
Depends
R (>= 3.3.0)
Imports
Rcpp (>= 0.12.13)
Suggests
knitr, testthat, parallel, doParallel
LinkingTo
Rcpp, RcppProgress
RoxygenNote
6.0.1
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2018-05-30 17:07:19 UTC; msesia
Repository
CRAN
Date/Publication
2018-05-30 17:51:41 UTC

install.packages('SNPknock')

0.7.1

a month ago

https://web.stanford.edu/group/candes/knockoffs/software/snpknock/

Matteo Sesia

GPL (>= 2)

Depends on

R (>= 3.3.0)

Imports

Rcpp (>= 0.12.13)

Suggests

knitr, testthat, parallel, doParallel

Discussions