ToxicoGx

Analysis of Large-Scale Toxico-Genomic Data

Contains a set of functions to perform large-scale analysis of toxico-genomic data. A member of the BHK lab's Gx suite of software, this package provides a standardized data structure to hold information relevant to annotation, visualization and statistical analysis of toxico-genomic data. This package is in early release, and more features will be added over the next few months.

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Description file content

Package
ToxicoGx
Type
Package
Title
Analysis of Large-Scale Toxico-Genomic Data
Version
0.1.1
Date
2020-01-15
Description
Contains a set of functions to perform large-scale analysis of toxico-genomic data. A member of the BHK lab's Gx suite of software, this package provides a standardized data structure to hold information relevant to annotation, visualization and statistical analysis of toxico-genomic data. This package is in early release, and more features will be added over the next few months.
License
MIT + file LICENSE
Encoding
UTF-8
LazyData
true
Depends
R (>= 3.5.0), CoreGx
Imports
SummarizedExperiment, Biobase, RColorBrewer, ggplot2, data.table, tibble, dplyr, caTools, downloader, magrittr, methods, reshape2, tidyr, scales
RoxygenNote
7.0.2
VignetteBuilder
knitr
Suggests
testthat (>= 2.1.0), rmarkdown, knitr, tinytex, knitcitations, devtools, PharmacoGx, xtable
NeedsCompilation
no
Packaged
2020-01-20 15:40:18 UTC; ceeles
Author
Sisira Nair [aut], Esther Yoo [aut], Christopher Eeles [aut], Amy Tang [aut], Nehme El-Hachem [aut], Petr Smirnov [aut], Benjamin Haibe-Kains [aut, cre]
Maintainer
Benjamin Haibe-Kains
Repository
CRAN
Date/Publication
2020-01-20 17:00:24 UTC

install.packages('ToxicoGx')

0.1.1

4 days ago

Benjamin Haibe-Kains

MIT + file LICENSE

Depends on

R (>= 3.5.0), CoreGx

Imports

SummarizedExperiment, Biobase, RColorBrewer, ggplot2, data.table, tibble, dplyr, caTools, downloader, magrittr, methods, reshape2, tidyr, scales

Suggests

testthat (>= 2.1.0), rmarkdown, knitr, tinytex, knitcitations, devtools, PharmacoGx, xtable

Discussions