UCSCXenaTools

Download and Explore Datasets from UCSC Xena Data Hubs

Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others. Databases are normalized so they can be combined, linked, filtered, explored and downloaded.

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Description file content

Package
UCSCXenaTools
Title
Download and Explore Datasets from UCSC Xena Data Hubs
Version
1.2.3
Maintainer
Shixiang Wang
URL
BugReports
https://github.com/ShixiangWang/UCSCXenaTools/issues
Description
Download and explore datasets from UCSC Xena data hubs, which are a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others. Databases are normalized so they can be combined, linked, filtered, explored and downloaded.
Depends
R (>= 3.0)
Imports
httr, readr, methods, utils, dplyr, magrittr, jsonlite, shinydashboard, shiny, DT
License
GPL-3
Encoding
UTF-8
LazyData
true
Suggests
knitr, rmarkdown, prettydoc, testthat (>= 2.1.0), covr
VignetteBuilder
knitr
RoxygenNote
6.1.1
NeedsCompilation
no
Packaged
2019-06-21 05:57:01 UTC; wsx
Author
Shixiang Wang [aut, cre] (), Martin Morgan [aut]
Repository
CRAN
Date/Publication
2019-06-21 08:30:03 UTC

install.packages('UCSCXenaTools')

1.2.3

26 days ago

https://github.com/ShixiangWang/UCSCXenaTools

Shixiang Wang

GPL-3

Depends on

R (>= 3.0)

Imports

httr, readr, methods, utils, dplyr, magrittr, jsonlite, shinydashboard, shiny, DT

Suggests

knitr, rmarkdown, prettydoc, testthat (>= 2.1.0), covr

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