aroma.core

Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework

Core methods and classes used by higher-level 'aroma.*' packages part of the Aroma Project, e.g. 'aroma.affymetrix' and 'aroma.cn'.

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Package
aroma.core
Version
3.1.3
Depends
R (>= 3.2.0), R.utils (>= 2.6.0), R.filesets (>= 2.12.1), R.devices (>= 2.15.1)
DependsNote
BioC (>= 3.0)
Imports
stats, utils, R.methodsS3 (>= 1.7.1), R.oo (>= 1.22.0), R.cache (>= 0.13.0), R.rsp (>= 0.42.0), matrixStats (>= 0.53.1), RColorBrewer (>= 1.1-2), PSCBS (>= 0.63.0), listenv, future
Suggests
KernSmooth, png (>= 0.1-7), Cairo (>= 1.5-9), EBImage (>= 4.8.3), preprocessCore (>= 1.28.0), aroma.light (>= 2.2.1), DNAcopy (>= 1.40.0), GLAD (>= 2.30.0), sfit (>= 0.1.8), expectile (>= 0.2.5), HaarSeg (>= 0.0.2), mpcbs (>= 1.1.1)
SuggestsNote
BioC (>= 3.0), Recommended: aroma.light, DNAcopy, png, preprocessCore, sfit
Additional_repositories
http://r-forge.r-project.org, https://henrikbengtsson.github.io/drat
Date
2018-04-29
Title
Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
Description
Core methods and classes used by higher-level 'aroma.*' packages part of the Aroma Project, e.g. 'aroma.affymetrix' and 'aroma.cn'.
License
LGPL (>= 2.1)
URL
BugReports
https://github.com/HenrikBengtsson/aroma.core/issues
LazyLoad
TRUE
biocViews
Microarray, OneChannel, TwoChannel, MultiChannel, DataImport, DataRepresentation, GUI, Visualization, Preprocessing, QualityControl, aCGH, CopyNumberVariants
RoxygenNote
6.0.1
NeedsCompilation
no
Packaged
2018-05-01 01:26:32 UTC; hb
Author
Henrik Bengtsson [aut, cre, cph], Mark Robinson [ctb], Ken Simpson [ctb]
Maintainer
Henrik Bengtsson
Repository
CRAN
Date/Publication
2018-05-03 13:41:54 UTC

install.packages('aroma.core')

3.1.3

2 months ago

https://github.com/HenrikBengtsson/aroma.core

Henrik Bengtsson

LGPL (>= 2.1)

Depends on

R (>= 3.2.0), R.utils (>= 2.6.0), R.filesets (>= 2.12.1), R.devices (>= 2.15.1)

Imports

stats, utils, R.methodsS3 (>= 1.7.1), R.oo (>= 1.22.0), R.cache (>= 0.13.0), R.rsp (>= 0.42.0), matrixStats (>= 0.53.1), RColorBrewer (>= 1.1-2), PSCBS (>= 0.63.0), listenv, future

Suggests

KernSmooth, png (>= 0.1-7), Cairo (>= 1.5-9), EBImage (>= 4.8.3), preprocessCore (>= 1.28.0), aroma.light (>= 2.2.1), DNAcopy (>= 1.40.0), GLAD (>= 2.30.0), sfit (>= 0.1.8), expectile (>= 0.2.5), HaarSeg (>= 0.0.2), mpcbs (>= 1.1.1)

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