bayou

Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies

Tools for fitting and simulating multi-optima Ornstein-Uhlenbeck models to phylogenetic comparative data using Bayesian reversible-jump methods.

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Description file content

Package
bayou
Type
Package
Title
Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
Version
2.1.1
Date
2018-10-9
Author
Josef C. Uyeda, Jon Eastman and Luke Harmon
Maintainer
Josef C. Uyeda
Description
Tools for fitting and simulating multi-optima Ornstein-Uhlenbeck models to phylogenetic comparative data using Bayesian reversible-jump methods.
License
GPL (>= 2)
Depends
ape (>= 3.0-6), geiger(>= 2.0), R (>= 2.15.0), phytools, coda
Imports
Rcpp (>= 0.10.3), MASS, mnormt, fitdistrplus, denstrip, assertthat, foreach, Matrix, graphics, grDevices, stats
Suggests
doParallel
LinkingTo
Rcpp, RcppArmadillo
RoxygenNote
6.0.1
NeedsCompilation
yes
Packaged
2018-10-09 14:46:43 UTC; juyeda
Repository
CRAN
Date/Publication
2018-10-09 15:20:02 UTC

install.packages('bayou')

2.1.1

2 months ago

Josef C. Uyeda

GPL (>= 2)

Depends on

ape (>= 3.0-6), geiger(>= 2.0), R (>= 2.15.0), phytools, coda

Imports

Rcpp (>= 0.10.3), MASS, mnormt, fitdistrplus, denstrip, assertthat, foreach, Matrix, graphics, grDevices, stats

Suggests

doParallel

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