beautier

'BEAUti' from R

'BEAST2' (<http://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAUti 2' (which is part of 'BEAST2') is a GUI tool that allows users to specify the many possible setups and generates the XML file 'BEAST2' needs to run. This package provides a way to create 'BEAST2' input files without active user input, but using R function calls instead.

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Description file content

Package
beautier
Title
'BEAUti' from R
Version
2.3.2
Maintainer
Richèl J.C. Bilderbeek
Description
'BEAST2' () is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAUti 2' (which is part of 'BEAST2') is a GUI tool that allows users to specify the many possible setups and generates the XML file 'BEAST2' needs to run. This package provides a way to create 'BEAST2' input files without active user input, but using R function calls instead.
License
GPL-3
LazyData
true
RoxygenNote
6.1.1
VignetteBuilder
knitr
URL
BugReports
https://github.com/ropensci/beautier/issues
Imports
ape, assertive, geiger, rappdirs, seqinr, stringr, testit
Suggests
spelling, devtools, knitr, ggplot2, hunspell, lintr, rmarkdown, testthat (>= 2.1.0)
Language
en-US
Encoding
UTF-8
NeedsCompilation
no
Packaged
2019-11-30 12:56:40 UTC; richel
Author
Richèl J.C. Bilderbeek [aut, cre] (), Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), David Winter [rev] (David reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), Paul Van Els [ctb], Raphael Scherrer [ctb], Yacine B. Chehida [ctb], Jana Riederer [ctb]
Repository
CRAN
Date/Publication
2019-12-01 21:00:02 UTC

install.packages('beautier')

2.3.2

14 days ago

https://github.com/ropensci/beautier

Richèl J.C. Bilderbeek

GPL-3

Imports

ape, assertive, geiger, rappdirs, seqinr, stringr, testit

Suggests

spelling, devtools, knitr, ggplot2, hunspell, lintr, rmarkdown, testthat (>= 2.1.0)

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