brainGraph

Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

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Description file content

Package
brainGraph
Type
Package
Version
2.7.3
Date
2019-11-07
Title
Graph Theory Analysis of Brain MRI Data
Description
A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.
URL
BugReports
https://groups.google.com/forum/?hl=en#!forum/brainGraph-help
LazyData
true
Depends
R (>= 3.0.0), igraph (>= 1.0.0),
Imports
abind, ade4, boot, data.table, expm, foreach, ggplot2, ggrepel, gridExtra, Hmisc, MASS, Matrix, methods, oro.nifti, permute, parallel, RcppEigen, scales
Suggests
RGtk2, cairoDevice, mediation
License
GPL-3
RoxygenNote
6.1.1
NeedsCompilation
no
Packaged
2019-11-07 06:30:39 UTC; cwatson
Author
Christopher G. Watson [aut, cre] ()
Maintainer
Christopher G. Watson
Repository
CRAN
Date/Publication
2019-11-07 13:40:10 UTC

install.packages('brainGraph')

2.7.3

8 days ago

https://github.com/cwatson/brainGraph

Christopher G. Watson

GPL-3

Depends on

R (>= 3.0.0), igraph (>= 1.0.0),

Imports

abind, ade4, boot, data.table, expm, foreach, ggplot2, ggrepel, gridExtra, Hmisc, MASS, Matrix, methods, oro.nifti, permute, parallel, RcppEigen, scales

Suggests

RGtk2, cairoDevice, mediation

Discussions