cOde

Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'

Generates all necessary C functions allowing the user to work with the compiled-code interface of ode() and bvptwp(). The implementation supports "forcings" and "events". Also provides functions to symbolically compute Jacobians, sensitivity equations and adjoint sensitivities being the basis for sensitivity analysis. Alternatively to 'deSolve', the Sundials 'CVODES' solver is implemented for computation of model sensitivities.

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Description file content

Package
cOde
Type
Package
Title
Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'
Version
0.4.1
NeedsCompilation
yes
Depends
R (>= 3.0)
Suggests
deSolve, bvpSolve
Imports
Rcpp (>= 0.11.3)
LinkingTo
Rcpp, RcppArmadillo
SystemRequirements
C++11
Date
2018-08-08
Author
Daniel Kaschek
Maintainer
Daniel Kaschek
Description
Generates all necessary C functions allowing the user to work with the compiled-code interface of ode() and bvptwp(). The implementation supports "forcings" and "events". Also provides functions to symbolically compute Jacobians, sensitivity equations and adjoint sensitivities being the basis for sensitivity analysis. Alternatively to 'deSolve', the Sundials 'CVODES' solver is implemented for computation of model sensitivities.
License
GPL (>= 2)
RoxygenNote
6.0.1
Packaged
2018-08-08 15:01:13 UTC; kaschek
Repository
CRAN
Date/Publication
2018-08-08 15:40:06 UTC

install.packages('cOde')

0.4.1

2 months ago

Daniel Kaschek

GPL (>= 2)

Depends on

R (>= 3.0)

Imports

Rcpp (>= 0.11.3)

Suggests

deSolve, bvpSolve

Discussions