freesurfer

Wrapper Functions for 'Freesurfer'

Wrapper functions that interface with 'Freesurfer' <https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.

Total

2,772

Last month

678

Last week

59

Average per day

23

Daily downloads

Total downloads

Description file content

Package
freesurfer
Type
Package
Title
Wrapper Functions for 'Freesurfer'
Version
1.6.1
Author
John Muschelli
Maintainer
John Muschelli
Description
Wrapper functions that interface with 'Freesurfer' , a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.
LazyData
true
LazyLoad
true
Imports
methods, neurobase, tools, R.utils, reshape2
Depends
R (>= 3.2.0)
License
GPL-3
Suggests
magrittr, knitr, oro.nifti (>= 0.7), rgl, rmarkdown, pander, fslr (>= 2.9.2)
BugReports
https://github.com/muschellij2/freesurfer/issues
SystemRequirements
Freesurfer (https://surfer.nmr.mgh.harvard.edu/)
RoxygenNote
6.0.1.9000
VignetteBuilder
knitr
Encoding
UTF-8
NeedsCompilation
no
Packaged
2017-10-10 00:38:33 UTC; johnmuschelli
Repository
CRAN
Date/Publication
2017-10-10 14:20:36 UTC

install.packages('freesurfer')

1.6.1

12 days ago

John Muschelli

GPL-3

Depends on

R (>= 3.2.0)

Imports

methods, neurobase, tools, R.utils, reshape2

Suggests

magrittr, knitr, oro.nifti (>= 0.7), rgl, rmarkdown, pander, fslr (>= 2.9.2)

Discussions