hisse

Hidden State Speciation and Extinction

Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification. Beaulieu and O'Meara (2016) <doi:10.1093/sysbio/syw022>.

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Description file content

Package
hisse
Version
1.8.5
Date
2017-10-9
Title
Hidden State Speciation and Extinction
Maintainer
Jeremy Beaulieu
Depends
ape, deSolve, GenSA, subplex, nloptr
Suggests
testthat, diversitree, knitr
Imports
parallel, phytools, data.table, methods
Description
Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification. Beaulieu and O'Meara (2016) .
License
GPL (>= 2)
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2017-10-10 13:43:50 UTC; jmbeauli
Author
Jeremy Beaulieu [aut, cre], Brian O'Meara [aut]
Repository
CRAN
Date/Publication
2017-10-10 16:57:10 UTC

install.packages('hisse')

1.8.5

12 days ago

Jeremy Beaulieu

GPL (>= 2)

Depends on

ape, deSolve, GenSA, subplex, nloptr

Imports

parallel, phytools, data.table, methods

Suggests

testthat, diversitree, knitr

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