hisse

Hidden State Speciation and Extinction

Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification. Beaulieu and O'Meara (2016) <doi:10.1093/sysbio/syw022>.

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Description file content

Package
hisse
Version
1.8.9
Date
2018-11-5
Title
Hidden State Speciation and Extinction
Maintainer
Jeremy Beaulieu
Depends
ape, deSolve, GenSA, subplex, nloptr
Suggests
testthat, knitr
Imports
parallel, phytools, data.table, methods, diversitree, plotrix
Description
Sets up and executes a HiSSE model (Hidden State Speciation and Extinction) on a phylogeny and character sets to test for hidden shifts in trait dependent rates of diversification. Beaulieu and O'Meara (2016) .
License
GPL (>= 2)
VignetteBuilder
knitr
RoxygenNote
6.0.1
NeedsCompilation
yes
Packaged
2018-11-06 15:10:48 UTC; jmbeauli
Author
Jeremy Beaulieu [aut, cre], Brian O'Meara [aut], Daniel Caetano [aut]
Repository
CRAN
Date/Publication
2018-11-06 16:20:02 UTC

install.packages('hisse')

1.8.9

11 days ago

Jeremy Beaulieu

GPL (>= 2)

Depends on

ape, deSolve, GenSA, subplex, nloptr

Imports

parallel, phytools, data.table, methods, diversitree, plotrix

Suggests

testthat, knitr

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