hommel

Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method

Provides methods for closed testing using Simes local tests. In particular, calculates adjusted p-values for Hommel's multiple testing method, and provides lower confidence bounds for true discovery proportions. A robust but more conservative variant of the closed testing procedure that does not require the assumption of Simes inequality is also implemented. The methods have been described in detail in Goeman et al (2016) <arXiv:1611.06739v2>.

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Description file content

Package
hommel
Type
Package
Title
Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method
Version
1.5
Date
2019-11-25
Author
Jelle Goeman, Rosa Meijer, Thijmen Krebs
Maintainer
Jelle Goeman
Description
Provides methods for closed testing using Simes local tests. In particular, calculates adjusted p-values for Hommel's multiple testing method, and provides lower confidence bounds for true discovery proportions. A robust but more conservative variant of the closed testing procedure that does not require the assumption of Simes inequality is also implemented. The methods have been described in detail in Goeman et al (2016) .
License
GPL (>= 2)
Imports
Rcpp, methods
LinkingTo
Rcpp
NeedsCompilation
yes
Packaged
2019-12-02 19:19:07 UTC; Jelle
Repository
CRAN
Date/Publication
2019-12-02 20:30:02 UTC

install.packages('hommel')

1.5

13 days ago

Jelle Goeman

GPL (>= 2)

Imports

Rcpp, methods

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