incidence

Compute, Handle, Plot and Model Incidence of Dated Events

Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence' is used to store computed incidence and can be easily manipulated, subsetted, and plotted. In addition, log-linear models can be fitted to 'incidence' objects using 'fit'. This package is part of the RECON (<http://www.repidemicsconsortium.org/>) toolkit for outbreak analysis.

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Description file content

Package
incidence
Type
Package
Title
Compute, Handle, Plot and Model Incidence of Dated Events
Version
1.7.0
Date
2019-03-14
Description
Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence' is used to store computed incidence and can be easily manipulated, subsetted, and plotted. In addition, log-linear models can be fitted to 'incidence' objects using 'fit'. This package is part of the RECON () toolkit for outbreak analysis.
Encoding
UTF-8
License
MIT + file LICENSE
URL
BugReports
http://github.com/reconhub/incidence/issues
RoxygenNote
6.1.1
Imports
ggplot2, aweek (>= 0.2.0)
Suggests
magrittr, outbreaks, testthat, vdiffr, covr, knitr, rmarkdown, scales, cowplot
VignetteBuilder
knitr
NeedsCompilation
no
Packaged
2019-03-14 16:04:52 UTC; zkamvar
Author
Thibaut Jombart [aut], Zhian N. Kamvar [aut, cre] (), Rich FitzJohn [aut], Jun Cai [ctb] (), Sangeeta Bhatia [ctb], Jakob Schumacher [ctb], Juliet R.C. Pulliam [ctb] ()
Maintainer
Zhian N. Kamvar
Repository
CRAN
Date/Publication
2019-03-14 16:30:10 UTC

install.packages('incidence')

1.7.0

6 days ago

http://www.repidemicsconsortium.org/incidence/

Zhian N. Kamvar

MIT + file LICENSE

Imports

ggplot2, aweek (>= 0.2.0)

Suggests

magrittr, outbreaks, testthat, vdiffr, covr, knitr, rmarkdown, scales, cowplot

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