phylogram

Dendrograms for Evolutionary Analysis

Contains functions for developing phylogenetic trees as deeply-nested lists ("dendrogram" objects). Enables bi-directional conversion between dendrogram and "phylo" objects (see Paradis et al (2004) <doi:10.1093/bioinformatics/btg412>), and features several tools for command-line tree manipulation and import/export via Newick parenthetic text.

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Description file content

Package
phylogram
Type
Package
Title
Dendrograms for Evolutionary Analysis
Version
2.1.0
Maintainer
Shaun Wilkinson
Description
Contains functions for developing phylogenetic trees as deeply-nested lists ("dendrogram" objects). Enables bi-directional conversion between dendrogram and "phylo" objects (see Paradis et al (2004) ), and features several tools for command-line tree manipulation and import/export via Newick parenthetic text.
License
GPL-3
LazyData
TRUE
URL
BugReports
http://github.com/ropensci/phylogram/issues
Encoding
UTF-8
Imports
ape (>= 4.0), methods, stats
Suggests
dendextend, knitr, rmarkdown, testthat
RoxygenNote
6.0.1
VignetteBuilder
knitr
NeedsCompilation
no
Packaged
2018-06-25 11:46:26 UTC; shaun
Author
Shaun Wilkinson [aut, cre] (), Simon Davy [aut] ()
Repository
CRAN
Date/Publication
2018-06-25 15:24:56 UTC

install.packages('phylogram')

2.1.0

2 months ago

http://github.com/ropensci/phylogram

Shaun Wilkinson

GPL-3

Imports

ape (>= 4.0), methods, stats

Suggests

dendextend, knitr, rmarkdown, testthat

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