phylosignal

Exploring the Phylogenetic Signal in Continuous Traits

A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.

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Description file content

Package
phylosignal
Type
Package
Title
Exploring the Phylogenetic Signal in Continuous Traits
Version
1.2
Date
2018-01-09
Author
Francois Keck
Maintainer
Francois Keck
Description
A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.
License
GPL-3
Imports
Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI, graphics, grDevices, methods, stats, utils
LinkingTo
Rcpp, RcppArmadillo
Suggests
testthat, knitr, rmarkdown
RoxygenNote
6.0.1
LazyLoad
yes
LazyData
true
Encoding
UTF-8
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2018-01-10 15:37:11 UTC; fske0001
Repository
CRAN
Date/Publication
2018-01-10 16:05:42 UTC

install.packages('phylosignal')

1.2

11 months ago

Francois Keck

GPL-3

Imports

Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI, graphics, grDevices, methods, stats, utils

Suggests

testthat, knitr, rmarkdown

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