prioritizr

Systematic Conservation Prioritization in R

Conservation prioritization using integer programming techniques. To solve large-scale problems, users should install the 'gurobi' optimizer (available from <http://www.gurobi.com/>).

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Package
prioritizr
Type
Package
Version
4.0.4
Title
Systematic Conservation Prioritization in R
Description
Conservation prioritization using integer programming techniques. To solve large-scale problems, users should install the 'gurobi' optimizer (available from ).
Imports
utils, methods, assertthat(>= 0.2.0), data.table, uuid, Matrix, igraph, ape, rgeos, plyr, parallel, doParallel, magrittr, tibble(>= 2.0.0)
Suggests
testthat, knitr, roxygen2, shiny, xtable, rhandsontable, RandomFields, velox, maptools, PBSmapping, spdep, gurobi, lpsymphony, Rsymphony, rmarkdown, prioritizrdata
Depends
R(>= 3.4.0), raster, sp, proto
LinkingTo
Rcpp, RcppArmadillo, BH
License
GPL-3
LazyData
true
SystemRequirements
C++11
URL
BugReports
https://github.com/prioritizr/prioritizr/issues
VignetteBuilder
knitr
RoxygenNote
6.1.1
Collate
'internal.R' 'pproto.R' 'Parameter-proto.R' 'ArrayParameter-proto.R' 'MiscParameter-proto.R' 'Parameters-proto.R' 'ScalarParameter-proto.R' 'parameters.R' 'waiver.R' 'ConservationModifier-proto.R' 'Penalty-proto.R' 'Constraint-proto.R' 'Collection-proto.R' 'category_vector.R' 'category_layer.R' 'binary_stack.R' 'ConservationProblem-proto.R' 'Decision-proto.R' 'Id.R' 'Objective-proto.R' 'OptimizationProblem-proto.R' 'OptimizationProblem-methods.R' 'Portfolio-proto.R' 'RcppExports.R' 'Solver-proto.R' 'Target-proto.R' 'zones.R' 'add_absolute_targets.R' 'add_binary_decisions.R' 'marxan_boundary_data_to_matrix.R' 'add_boundary_penalties.R' 'add_connectivity_penalties.R' 'add_contiguity_constraints.R' 'add_cuts_portfolio.R' 'add_default_decisions.R' 'add_default_objective.R' 'add_default_portfolio.R' 'add_default_solver.R' 'add_default_targets.R' 'add_feature_contiguity_constraints.R' 'add_feature_weights.R' 'add_gurobi_solver.R' 'intersecting_units.R' 'add_locked_in_constraints.R' 'add_locked_out_constraints.R' 'loglinear_interpolation.R' 'add_loglinear_targets.R' 'add_lpsymphony_solver.R' 'add_mandatory_allocation_constraints.R' 'tbl_df.R' 'add_manual_targets.R' 'add_manual_locked_constraints.R' 'add_max_cover_objective.R' 'add_max_features_objective.R' 'add_max_phylo_objective.R' 'add_max_utility_objective.R' 'add_min_set_objective.R' 'add_neighbor_contraints.R' 'add_pool_portfolio.R' 'add_proportion_decisions.R' 'add_relative_targets.R' 'add_rsymphony_solver.R' 'add_semicontinuous_decisions.R' 'add_shuffle_portfolio.R' 'boundary_matrix.R' 'branch_matrix.R' 'compile.R' 'connected_matrix.R' 'connectivity_matrix.R' 'constraints.R' 'data.R' 'decisions.R' 'deprecated.R' 'parallel.R' 'fast_extract.R' 'feature_abundances.R' 'feature_names.R' 'feature_representation.R' 'magrittr-operators.R' 'marxan_problem.R' 'misc.R' 'new_optimization_problem.R' 'number_of_features.R' 'number_of_planning_units.R' 'number_of_total_units.R' 'number_of_zones.R' 'objectives.R' 'package.R' 'penalties.R' 'portfolios.R' 'predefined_optimization_problem.R' 'print.R' 'problem.R' 'rij_matrix.R' 'run_calculations.R' 'show.R' 'simulate.R' 'solve.R' 'solvers.R' 'targets.R' 'zone_names.R' 'zzz.R'
NeedsCompilation
yes
Packaged
2019-04-11 22:25:34 UTC; richard
Author
Jeffrey O Hanson [aut], Richard Schuster [aut, cre], Nina Morrell [aut], Matthew Strimas-Mackey [aut], Matthew E Watts [aut], Peter Arcese [aut], Joeseph Bennett [aut], Hugh P Possingham [aut]
Maintainer
Richard Schuster
Repository
CRAN
Date/Publication
2019-04-12 12:32:42 UTC

install.packages('prioritizr')

4.0.4

12 days ago

https://prioritizr.net

Richard Schuster

GPL-3

Depends on

R(>= 3.4.0), raster, sp, proto

Imports

utils, methods, assertthat(>= 0.2.0), data.table, uuid, Matrix, igraph, ape, rgeos, plyr, parallel, doParallel, magrittr, tibble(>= 2.0.0)

Suggests

testthat, knitr, roxygen2, shiny, xtable, rhandsontable, RandomFields, velox, maptools, PBSmapping, spdep, gurobi, lpsymphony, Rsymphony, rmarkdown, prioritizrdata

Discussions