scBio

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.

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Description file content

Package
scBio
Type
Package
Title
Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data
Version
0.1.2
Author
Amit Frishberg [aut, cre], Naama Peshes-Yaloz [aut], Irit Gat-Viks [aut]
Maintainer
Amit Frishberg
Description
Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.
License
GPL-2
Encoding
UTF-8
LazyData
true
RoxygenNote
6.1.0
biocViews
limma
Depends
R (>= 2.10)
Imports
sp, foreach, parallel, doSNOW, raster, fields, LiblineaR, limma
NeedsCompilation
no
Packaged
2018-10-21 11:38:40 UTC; IritGNB5
Repository
CRAN
Date/Publication
2018-10-21 15:40:02 UTC

install.packages('scBio')

0.1.2

a month ago

Amit Frishberg

GPL-2

Depends on

R (>= 2.10)

Imports

sp, foreach, parallel, doSNOW, raster, fields, LiblineaR, limma

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