simode

Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching

Implements statistical inference for systems of ordinary differential equations, that uses the integral-matching criterion and takes advantage of the separability of parameters, in order to obtain initial parameter estimates for nonlinear least squares optimization. Dattner & Yaari (2018) <arXiv:1807.04202>. Dattner et al. (2017) <doi:10.1098/rsif.2016.0525>. Dattner & Klaassen (2015) <doi:10.1214/15-EJS1053>.

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Description file content

Package
simode
Type
Package
Title
Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching
Version
1.1.8
Description
Implements statistical inference for systems of ordinary differential equations, that uses the integral-matching criterion and takes advantage of the separability of parameters, in order to obtain initial parameter estimates for nonlinear least squares optimization. Dattner & Yaari (2018) . Dattner et al. (2017) . Dattner & Klaassen (2015) .
Depends
R (>= 3.4.0)
Imports
deSolve, pracma, quadprog
Suggests
parallel, Rcgmin, Rvmmin, R.rsp, knitr, testthat
License
GPL (>= 2)
Encoding
UTF-8
LazyData
true
RoxygenNote
6.1.1
VignetteBuilder
R.rsp
NeedsCompilation
no
Packaged
2019-12-01 16:07:48 UTC; ramiy
Author
Itai Dattner [aut], Rami Yaari [aut, cre]
Maintainer
Rami Yaari
Repository
CRAN
Date/Publication
2019-12-01 20:00:02 UTC

install.packages('simode')

1.1.8

14 days ago

Rami Yaari

GPL (>= 2)

Depends on

R (>= 3.4.0)

Imports

deSolve, pracma, quadprog

Suggests

parallel, Rcgmin, Rvmmin, R.rsp, knitr, testthat

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