snplist

Tools to Create Gene Sets

A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.

Total

13,267

Last month

379

Last week

76

Average per day

13

Daily downloads

Total downloads

Description file content

Package
snplist
Type
Package
Title
Tools to Create Gene Sets
Version
0.18.1
Date
2017-12-11
Author
Chanhee Yi, Alexander Sibley, and Kouros Owzar
Maintainer
Alexander Sibley
Description
A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.
License
GPL-3
Depends
R (>= 3.0.0), RSQLite (>= 1.1)
Imports
biomaRt (>= 2.16.0), Rcpp (>= 0.10.5), R.utils (>= 1.27.1), DBI (>= 0.3.1)
Suggests
knitr
LinkingTo
Rcpp
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2017-12-11 17:34:43 UTC; abs33
Repository
CRAN
Date/Publication
2017-12-11 19:12:03 UTC

install.packages('snplist')

0.18.1

a year ago

Alexander Sibley

GPL-3

Depends on

R (>= 3.0.0), RSQLite (>= 1.1)

Imports

biomaRt (>= 2.16.0), Rcpp (>= 0.10.5), R.utils (>= 1.27.1), DBI (>= 0.3.1)

Suggests

knitr

Discussions