snplist

Tools to Create Gene Sets

A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.

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Description file content

Package
snplist
Type
Package
Title
Tools to Create Gene Sets
Version
0.18.1
Date
2017-12-11
Author
Chanhee Yi, Alexander Sibley, and Kouros Owzar
Maintainer
Alexander Sibley
Description
A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.
License
GPL-3
Depends
R (>= 3.0.0), RSQLite (>= 1.1)
Imports
biomaRt (>= 2.16.0), Rcpp (>= 0.10.5), R.utils (>= 1.27.1), DBI (>= 0.3.1)
Suggests
knitr
LinkingTo
Rcpp
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2017-12-11 17:34:43 UTC; abs33
Repository
CRAN
Date/Publication
2017-12-11 19:12:03 UTC

install.packages('snplist')

0.18.1

7 months ago

Alexander Sibley

GPL-3

Depends on

R (>= 3.0.0), RSQLite (>= 1.1)

Imports

biomaRt (>= 2.16.0), Rcpp (>= 0.10.5), R.utils (>= 1.27.1), DBI (>= 0.3.1)

Suggests

knitr

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