tidygenomics

Tidy Verbs for Dealing with Genomic Data Frames

Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.

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Description file content

Package
tidygenomics
Type
Package
Title
Tidy Verbs for Dealing with Genomic Data Frames
Version
0.1.2
Description
Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.
URL
License
GPL-3
Encoding
UTF-8
LazyData
true
Imports
dplyr, rlang, purrr, tidyr, fuzzyjoin (>= 0.1.3), IRanges, Rcpp
Suggests
testthat, knitr, rmarkdown
RoxygenNote
6.1.1
LinkingTo
Rcpp
VignetteBuilder
knitr
NeedsCompilation
yes
Packaged
2019-08-08 11:42:50 UTC; ahlmanne
Author
Constantin Ahlmann-Eltze [aut, cre] (), Stan Developers [cph] (Code from the Stan Math library is reused in 'cluster_interval.cpp'), David Robinson [cph] (Code from the fuzzyjoin package is reused)
Maintainer
Constantin Ahlmann-Eltze
Repository
CRAN
Date/Publication
2019-08-08 11:50:02 UTC

install.packages('tidygenomics')

0.1.2

4 months ago

https://github.com/const-ae/tidygenomics

Constantin Ahlmann-Eltze

GPL-3

Imports

dplyr, rlang, purrr, tidyr, fuzzyjoin (>= 0.1.3), IRanges, Rcpp

Suggests

testthat, knitr, rmarkdown

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