tsiR

An Implementation of the TSIR Model

An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <https://doi:10.1371/0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <DOI: 10.1111/1467-9876.00187>.

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Description file content

Package
tsiR
Type
Package
Title
An Implementation of the TSIR Model
Version
0.4.2
Date
2019-07-09
Description
An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here . The method implemented here is described by Finkenstadt and Grenfell (2000) .
Depends
R (>= 3.1.0)
License
GPL-3
LazyData
true
Imports
ggplot2, kernlab, reshape2, grid
Contact
adbecker at princeton dot edu
RoxygenNote
6.1.0.9000
NeedsCompilation
no
Packaged
2019-07-09 10:45:56 UTC; adbecker
Author
Alexander D. Becker [aut, cre], Sinead E. Morris [ctb], Ottar N. Bjornstad [ctb]
Maintainer
Alexander D. Becker
Repository
CRAN
Date/Publication
2019-07-09 11:20:03 UTC

install.packages('tsiR')

0.4.2

9 days ago

Alexander D. Becker

GPL-3

Depends on

R (>= 3.1.0)

Imports

ggplot2, kernlab, reshape2, grid

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