TPES

Tumor Purity Estimation using SNVs

A bioinformatics tool for the estimation of the tumor purity from sequencing data. It uses the set of putative clonal somatic single nucleotide variants within copy number neutral segments to call tumor cellularity.

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Description file content

Package
TPES
Type
Package
Title
Tumor Purity Estimation using SNVs
Version
1.0.0
Date
2019-01-09
Author
Alessio Locallo , Davide Prandi , Francesca Demichelis
Maintainer
Alessio Locallo
Description
A bioinformatics tool for the estimation of the tumor purity from sequencing data. It uses the set of putative clonal somatic single nucleotide variants within copy number neutral segments to call tumor cellularity.
License
MIT + file LICENSE
Encoding
UTF-8
LazyData
true
RoxygenNote
6.1.1
Depends
R (>= 2.10)
Imports
grDevices, graphics, stats
NeedsCompilation
no
Packaged
2019-01-09 17:03:16 UTC; l0ka
Repository
CRAN
Date/Publication
2019-01-11 17:40:12 UTC

install.packages('TPES')

1.0.0

10 days ago

Alessio Locallo

MIT + file LICENSE

Depends on

R (>= 2.10)

Imports

grDevices, graphics, stats

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